Lecture Notes

Special software is required to use some of the files in this course: .mov.

The following table presents slides and resources from selected lecture presentations. No other materials are available.


LEC # TOPICS INSTRUCTORS
Part 3. Physics of image acquisition
6 MRI physics I (PDF - 1.5 MB) Wald
7 MRI physics II (PDF - 4.9 MB) Wald
8 MRI physics III (PDF - 2.1 MB) Wald
Part 4. Imaging physiology
9 Imaging physiology I: brain at the baseline (PDF - 1.7 MB) Bolar
10 Imaging physiology II: brain activation (PDF - 2.9 MB) Bolar
11

Imaging physiology III: BOLD imaging (PDF - 1.2 MB)

Supplemental video for slide 47

Screen grating animation (MOV)

Bolar
12

Imaging physiology IV: BOLD (cont.) and non-BOLD techniques (PDF - 2.4 MB)

Supplemental diffusion videos for slides 24-27

Large vessels: GRE (MOV)
Large vessels: SE (MOV)
Small vessels: GRE (MOV)
Small vessels: SE (MOV)

Bolar
13

Quantitative perfusion and diffusion imaging biomarkers

Physics of diffusion weighted imaging

Sorensen

Yendiki

Part 6. Statistical analysis
17 Stats 2: level 1 (PDF) Greve
18 Stats 3: level 1 (cont.) Greve
19 Stats 4: level 2 Greve
20 Stats 5: correction for multiple measures (PDF) Vangel
21

Stats 6: exploratory analysis, PCA, ICA, fuzzy clustering

Stats 7: causality (PDF)

Vangel
Part 7. Structure and functional analysis
22 Structural-functional integration Salat
23

Quantitative neuroimaging biomarkers (PDF - 1.6 MB)

Surface-based anatomical analysis

Helmer

Salat

24 Spatial normalization for group analysis (PDF) Sabuncu
25 Granger causality analysis for fMRI Vangel